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Pinart, M. (author), Dötsch, A. (author), Schlicht, K. (author), Laudes, M. (author), Bouwman, J. (author), Forslund, S.F. (author), Pischon, T. (author), Nimptsch, K. (author)Whether the gut microbiome in obesity is characterized by lower diversity and altered composition at the phylum or genus level may be more accurately investigated using high-through-put sequencing technologies. We conducted a systematic review in PubMed and Embase including 32 cross-sectional studies assessing the gut microbiome composition by...article 2022
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Sharon, I. (author), Quijada, N.M. (author), Pasolli, E. (author), Fabbrini, M. (author), Vitali, F. (author), Agamennone, V. (author), Dötsch, A. (author), Selberherr, E. (author), Grau, J.H. (author), Meixner, M. (author), Liere, K. (author), Ercolini, D. (author), de Filippo, C. (author), Caderni, G. (author), Brigidi, P. (author), Turroni, S. (author)The core microbiome, which refers to a set of consistent microbial features across populations, is of major interest in microbiome research and has been addressed by numerous studies. Understanding the core microbiome can help identify elements that lead to dysbiosis, and lead to treatments for microbiome-related health states. However, defining...article 2022
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Pinart, M. (author), Nimptsch, K. (author), Forslund, S.F. (author), Schlicht, K. (author), Gueimonde, M. (author), Brigidi, P. (author), Turroni, S. (author), Ahrens, W. (author), Hebestreit, A. (author), Wolters, M. (author), Dötsch, A. (author), Nöthlings, U. (author), Oluwagbemigun, K. (author), Cuadrat, R.R.C. (author), Schulze, M.B. (author), Standl, M. (author), Schloter, M. (author), De Angelis, M. (author), Iozzo, P. (author), Guzzardi, M.G. (author), Vlaemynck, G. (author), Penders, J (author), Jonkers, D.M.A.E. (author), Stemmer, M. (author), Chiesa, G. (author), Cavalieri, D. (author), De Filippo, C. (author), Ercolini, D. (author), De Filippis, F. (author), Ribet, D. (author), Achamrah, N. (author), Tavolacci, M.P. (author), Déchelotte, P. (author), Bouwman, J. (author), Laudes, M. (author), Pischon, T. (author)In any research field, data access and data integration are major challenges that even large, well-established consortia face. Although data sharing initiatives are increasing, joint data analyses on nutrition and microbiomics in health and disease are still scarce. We aimed to identify observational studies with data on nutrition and gut...article 2021